ADHDgene Database

SNP Report

Basic Info

Name	rs2556377 dbSNP Ensembl
Location	Chr2:60760637(Fwd)
Variant Alleles	G/A
Ancestral Allele	A
Functional Annotation	intron_variant; nc_transcript_variant; upstream_gene_variant.
Consequence to Transcript	intron_variant(ENST00000358510; ENST00000335712; ENST00000538214; ENST00000477659; ENST00000489516; ENST00000359629; ENST00000356842; ENST00000537768) nc_transcript_variant(ENST00000477659; ENST00000489516) upstream_gene_variant(ENST00000492272)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
BCL11A	B-cell CLL/lymphoma 11A (zinc finger protein)	2p16.1	1(0/0/1)

SNPs in LD with rs2556377 (count: 1) View in gBrowse (chr2:60760637..60762502 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs2556378	intron_variant; nc_transcript_variant	1(0/0/1)	1.0[CEU]; 0.947[CHB]; 0.939[CHD]; 0.959[GIH]; 0.924[JPT]; 0.91[LWK]; 1.0[MEX]; 0.931[MKK]; 0.965[TSI]; 0.881[YRI]