ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs2550948 dbSNP Ensembl
Location chr5:1450444(Fwd)
Variant Alleles C/T
Ancestral Allele C
Functional Annotation upstream_gene_variant.
Consequence to Transcript upstream_gene_variant(ENST00000270349)
No. of Studies 2 (significant: 2; non-significant: 0; trend: 0)
Source Literature-origin

SNP related studies (count: 2)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Genro JP, 2008 A/G P-value=0.363 for total sample; P-value=0.013 for combined s...... P-value=0.363 for total sample; P-value=0.013 for combined sample More... showed biased transmission for ADHD children in the DSM-IV c...... showed biased transmission for ADHD children in the DSM-IV combined subtype More... Significant
Brookes K, 2006 A/G UNPHASED TDT P-value=0.0121; WHAP TDT P-value=0.096 UNPHASED TDT P-value=0.0121; WHAP TDT P-value=0.096 significant association was observed in UNPHASED analysis significant association was observed in UNPHASED analysis Significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs2550948 (count: 7) View in gBrowse (chr5:1443498..1477310 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 7)