ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs2042449 dbSNP Ensembl
Location chr5:1416646(Fwd)
Variant Alleles G/A
Ancestral Allele G
Functional Annotation intron_variant; nc_transcript_variant; non_coding_exon_variant.
Consequence to Transcript intron_variant(ENST00000270349; ENST00000453492; ENST00000513308)
nc_transcript_variant(ENST00000511750)
non_coding_exon_variant(ENST00000511750)
No. of Studies 2 (significant: 1; non-significant: 1; trend: 0)
Source Literature-origin

SNP related studies (count: 2)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Brookes K, 2006 A/G UNPHASED TDT P-value=0.267; WHAP TDT P-value=0.048 UNPHASED TDT P-value=0.267; WHAP TDT P-value=0.048 significant association was observed in WHAP analysis significant association was observed in WHAP analysis Significant
Friedel S, 2007 C/T C FAMHAP P-value=0.78 in single marker association analysis FAMHAP P-value=0.78 in single marker association analysis No association was found with ADHD No association was found with ADHD Non-significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs2042449 (count: 5) View in gBrowse (chr5:1416646..1436102 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 5)