ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs2020942 dbSNP Ensembl
Location Chr17:28546914(Fwd)
Variant Alleles C/T
Ancestral Allele C
Functional Annotation intron_variant.
Consequence to Transcript intron_variant(ENST00000394821; ENST00000261707; ENST00000401766)
No. of Studies 2 (significant: 0; non-significant: 2; trend: 0)
Source Literature-origin

SNP related studies (count: 2)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Landaas ET, 2010 A/G P-value=0.43, OR=0.93 in the Norwegian samples; P-value=0.61...... P-value=0.43, OR=0.93 in the Norwegian samples; P-value=0.61, OR=0.94 in the Norwegian samples; P-value=0.63, OR=0.94 in the Norwegian males More... no significant association no significant association Non-significant
Brookes K, 2006 A/G UNPHASED TDT P-value=0.195; WHAP TDT P-value=0.309 UNPHASED TDT P-value=0.195; WHAP TDT P-value=0.309 no significant association was observed no significant association was observed Non-significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs2020942 (count: 2) View in gBrowse (chr17:28546914..28551665 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 2)

LD-proxies (count: 0)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014