ADHDgene Database

SNP Report

Basic Info

Name	rs2007494 dbSNP Ensembl
Location	Chr15:55792245(Fwd)
Variant Alleles	T/A
Ancestral Allele	A
Functional Annotation	intron_variant; upstream_gene_variant.
Consequence to Transcript	intron_variant(ENST00000321149; ENST00000380679; ENST00000348518) upstream_gene_variant(ENST00000519017; ENST00000524160; ENST00000565113; ENST00000457155; ENST00000522437; ENST00000568310; ENST00000448430)
No. of Studies	1 (significant: 0; non-significant: 1; trend: 0)
Source	Literature-origin

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result of Statistical Analysis
Wigg KG, 2008	T/A		TDT P-value=0.114, X²=2.5 TDT P-value=0.114, X²=2.5	no evidence for association no evidence for association	Non-significant

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
DYX1C1	dyslexia susceptibility 1 candidate 1	15q21.1	1(0/1/0)

Approved Symbol	Approved Name	Location
DYX1C1-CCPG1	DYX1C1-CCPG1 readthrough (non-protein coding)	15q

SNPs in LD with rs2007494 (count: 1) View in gBrowse (chr15:55790310..55792245 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs3743204	NMD_transcript_variant; intron_variant; nc_transcript_variant	1(0/1/0)	0.898[CEU]