ADHDgene Database

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Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

SNP Report

Basic Info

Name	rs1800955 dbSNP Ensembl
Location	Chr11:636784(Fwd)
Variant Alleles	T/C
Ancestral Allele	T
Functional Annotation	upstream_gene_variant.
Consequence to Transcript	upstream_gene_variant(ENST00000176183; ENST00000528733)
No. of Studies	3 (significant: 2; non-significant: 1; trend: 0)
Source	Literature-origin

SNP related studies (count: 3)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result of Statistical Analysis
Yang JW, 2008	C/T		genotypic P-value=0.043, X²=6.28; allelic P-value...... genotypic P-value=0.043, X²=6.28; allelic P-value=0.013, X²=6.22 More...	significant differences in the genotype and allele frequenci...... significant differences in the genotype and allele frequencies of the -521 C/T SNP More...	Significant
Das M, 2011	T/G		ETDT P-value=0.32, X²(1df)=1.002, RR=1; allelic f...... ETDT P-value=0.32, X²(1df)=1.002, RR=1; allelic frequencies COCAPHASE P-value=0.56, X²=0.34 for T; ETDT P-value=0.32, X²(1df)=1.002, RR=0.8; allelic frequencies COCAPHASE P-value=0.56, X²=0.34 for C More...	no significant contribution was noticed by either case-contr...... no significant contribution was noticed by either case-control or family-based analysis More...	Non-significant
Gizer IR, 2009			Meta-analysis model: Fixed: OR=1.21, 95% CI=1.04-1.41, P-val...... Meta-analysis model: Fixed: OR=1.21, 95% CI=1.04-1.41, P-value=0.007; Q-statistic: P-value=0.472, I²=0 More...	significant but modest association significant but modest association	Significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources (count: 0)

SNPs in LD with rs1800955 (count: 0) View in gBrowse (chr11:636784..636784 )