Home
Advanced Search
Cross Search
gBrowse
Download
Tutorial
About Us
Search Variant
Search Gene
Search Region
Search Pathway
Search Study
Search Variant with Study
Search Gene with Study
Search Region with Study
Tutorial
About Us
ADHDgene Database
Hot Results
Hot SNP list
Hot gene list
Quick Search
Keyword:
Type:
SNP
Gene
Region
Pathway
Study(PMID)
Large-scale studies
Genome-wide Association Studies of ADHD
Genome-wide Linkage Studies of ADHD
Genome-wide CNV Analyses of ADHD
Meta-analysis Studies of ADHD
Data Summary
Published Variant
SNP:
1391
CNV:
398
Others:
173
Published Gene:
359
Published Region:
128
Pathway by PBA:
8
Study:
361
Detail ...
SNP Report
Basic Info
Name
rs17167761
dbSNP
Ensembl
Location
Chr7:96369613(Fwd)
Variant Alleles
C/A
Ancestral Allele
C
No. of Studies
1 (significant: 0; non-significant: 0; trend: 1)
Source
Literature-origin
SNP related studies (count: 1)
Reference
Allele Change
Risk Allele
Statistical Values
Author Comments
Result of Statistical Analysis
Neale BM, 2010 (a)
A:C
P-value=1.51E-05
P-value=1.51E-05
one of top 50 hits from the Genome-Wide Attention-Deficit/Hy......
one of top 50 hits from the Genome-Wide Attention-Deficit/Hyperactivity Disorder (ADHD) meta-analysis
More...
Trend
SNP related genes (count: 0)
SNPs in LD with rs17167761 (count: 23)
View in gBrowse (chr7:96229033..96369613 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold
r
2
>=0.8.
Literature-origin SNPs (count: 1)
rs_ID
Functional Annotation
#studies(significant/non-significant/trend)
r
2
[population]
rs1464807
1(0/0/1)
0.918[CEU]; 1.0[CHB]; 0.95[CHD]; 0.808[GIH]; 1.0[JPT]; 1.0[MEX]; 0.911[TSI]
LD-proxies (count: 22)
rs_ID
Functional Annotation
r
2
[population]
rs10215915
intron_variant; nc_transcript_variant
0.8[JPT]
rs17497309
0.823[JPT]
rs10249092
NMD_transcript_variant; intron_variant; nc_transcript_variant
0.8[JPT]
rs6955994
NMD_transcript_variant; intron_variant; nc_transcript_variant
0.8[JPT]
rs10261833
NMD_transcript_variant; intron_variant; nc_transcript_variant
0.8[JPT]; 0.811[TSI]
rs12216616
intron_variant; nc_transcript_variant
0.8[JPT]; 0.811[TSI]
rs3823755
NMD_transcript_variant; intron_variant; nc_transcript_variant
0.8[JPT]
rs7808184
intron_variant; nc_transcript_variant
0.84[CEU]
rs10215003
downstream_gene_variant; intron_variant; nc_transcript_variant
0.8[JPT]; 0.811[TSI]
rs10261558
intron_variant; nc_transcript_variant
0.8[JPT]; 0.805[TSI]
rs9656040
intron_variant; nc_transcript_variant
0.8[JPT]
rs4410848
intron_variant; nc_transcript_variant
0.8[JPT]
rs4342522
NMD_transcript_variant; intron_variant; nc_transcript_variant; upstream_gene_variant
0.8[JPT]
rs10260320
NMD_transcript_variant; intron_variant; nc_transcript_variant
0.8[JPT]
rs4729274
NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant
0.8[JPT]
rs4729273
intron_variant; nc_transcript_variant
0.8[JPT]
rs10227638
intron_variant; nc_transcript_variant
0.8[JPT]
rs12670050
0.918[CEU]; 1.0[CHB]; 1.0[JPT]
rs6465531
3_prime_UTR_variant; intron_variant; nc_transcript_variant
0.8[JPT]
rs10272873
downstream_gene_variant; intron_variant; nc_transcript_variant
0.8[JPT]
rs10269596
intron_variant; nc_transcript_variant
0.8[JPT]
rs12537768
intron_variant; nc_transcript_variant
0.8[JPT]