ADHDgene Database

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Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

Detail ...

SNP Report

Basic Info

Name	rs1464807 dbSNP Ensembl
Location	chr7:96362344(Fwd)
Variant Alleles	G/T
Ancestral Allele	G
No. of Studies	1 (significant: 0; non-significant: 0; trend: 1)
Source	Literature-origin

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result of Statistical Analysis
Neale BM, 2010 (a)	T:G		P-value=1.10E-06 P-value=1.10E-06	one of top 50 hits from the Genome-Wide Attention-Deficit/Hy...... one of top 50 hits from the Genome-Wide Attention-Deficit/Hyperactivity Disorder (ADHD) meta-analysis More...	Trend

SNP related genes (count: 0)

SNPs in LD with rs1464807 (count: 21) View in gBrowse (chr7:96268743..96362344 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 21)

rs_ID	Functional Annotation	r²[population]
rs12216616	intron_variant; nc_transcript_variant	0.8[JPT]
rs12670050		1.0[CEU]; 1.0[CHB]; 1.0[JPT]
rs6465531	3_prime_UTR_variant; intron_variant; nc_transcript_variant	0.8[JPT]
rs10261833	intron_variant; nc_transcript_variant; NMD_transcript_variant	0.8[JPT]
rs9656040	intron_variant; nc_transcript_variant	0.8[JPT]
rs4342522	intron_variant; nc_transcript_variant; NMD_transcript_variant; upstream_gene_variant	0.8[JPT]
rs10215915	intron_variant; nc_transcript_variant	0.8[JPT]
rs3823755	intron_variant; nc_transcript_variant; NMD_transcript_variant	0.8[JPT]
rs10227638	intron_variant; nc_transcript_variant	0.8[JPT]
rs10260320	intron_variant; nc_transcript_variant; NMD_transcript_variant	0.8[JPT]
rs10249092	intron_variant; nc_transcript_variant; NMD_transcript_variant	0.8[JPT]
rs12537768	intron_variant; nc_transcript_variant; upstream_gene_variant	0.8[TSI]; 0.8[JPT]
rs6955994	intron_variant; nc_transcript_variant; NMD_transcript_variant	0.8[JPT]
rs10215003	downstream_gene_variant; intron_variant; nc_transcript_variant	0.8[JPT]
rs10269596	intron_variant; nc_transcript_variant; upstream_gene_variant	0.8[JPT]
rs10261558	intron_variant; nc_transcript_variant	0.8[JPT]
rs10272873	downstream_gene_variant; intron_variant; nc_transcript_variant	0.8[JPT]
rs17497309		0.823[JPT]
rs4729274	downstream_gene_variant; intron_variant; nc_transcript_variant; NMD_transcript_variant	0.8[JPT]
rs4410848	intron_variant; nc_transcript_variant	0.8[JPT]
rs4729273	intron_variant; nc_transcript_variant; upstream_gene_variant	0.8[JPT]