SNP Report

Basic Info
Name |
rs1464807
dbSNP
Ensembl
|
Location |
chr7:96362344(Fwd) |
Variant Alleles |
G/T |
Ancestral Allele |
G |
No. of Studies |
1 (significant: 0; non-significant: 0; trend: 1) |
Source |
Literature-origin
|

SNP related studies (count: 1)

SNP related genes (count: 0)
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.
Literature-origin SNPs (count: 0)
LD-proxies (count: 21)

rs_ID |
Functional Annotation |
r2[population] |
rs12216616
|
intron_variant; nc_transcript_variant |
0.8[JPT]
|
rs12670050
|
|
1.0[CEU]; 1.0[CHB]; 1.0[JPT]
|
rs6465531
|
3_prime_UTR_variant; intron_variant; nc_transcript_variant |
0.8[JPT]
|
rs10261833
|
intron_variant; nc_transcript_variant; NMD_transcript_variant |
0.8[JPT]
|
rs9656040
|
intron_variant; nc_transcript_variant |
0.8[JPT]
|
rs4342522
|
intron_variant; nc_transcript_variant; NMD_transcript_variant; upstream_gene_variant |
0.8[JPT]
|
rs10215915
|
intron_variant; nc_transcript_variant |
0.8[JPT]
|
rs3823755
|
intron_variant; nc_transcript_variant; NMD_transcript_variant |
0.8[JPT]
|
rs10227638
|
intron_variant; nc_transcript_variant |
0.8[JPT]
|
rs10260320
|
intron_variant; nc_transcript_variant; NMD_transcript_variant |
0.8[JPT]
|
rs10249092
|
intron_variant; nc_transcript_variant; NMD_transcript_variant |
0.8[JPT]
|
rs12537768
|
intron_variant; nc_transcript_variant; upstream_gene_variant |
0.8[TSI]; 0.8[JPT]
|
rs6955994
|
intron_variant; nc_transcript_variant; NMD_transcript_variant |
0.8[JPT]
|
rs10215003
|
downstream_gene_variant; intron_variant; nc_transcript_variant |
0.8[JPT]
|
rs10269596
|
intron_variant; nc_transcript_variant; upstream_gene_variant |
0.8[JPT]
|
rs10261558
|
intron_variant; nc_transcript_variant |
0.8[JPT]
|
rs10272873
|
downstream_gene_variant; intron_variant; nc_transcript_variant |
0.8[JPT]
|
rs17497309
|
|
0.823[JPT]
|
rs4729274
|
downstream_gene_variant; intron_variant; nc_transcript_variant; NMD_transcript_variant |
0.8[JPT]
|
rs4410848
|
intron_variant; nc_transcript_variant |
0.8[JPT]
|
rs4729273
|
intron_variant; nc_transcript_variant; upstream_gene_variant |
0.8[JPT]
|