ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs1542479 dbSNP Ensembl
Location chr9:93373049(Fwd)
Variant Alleles G/A
Ancestral Allele G
Functional Annotation 3_prime_UTR_variant.
Consequence to Transcript 3_prime_UTR_variant(ENST00000375765)
No. of Studies 1 (significant: 0; non-significant: 1; trend: 0)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Reif, A., 2011 G/A P-value=0.0905, OR (allele)=1.55 (A), 95% CI=0.93-2.59 in Ge...... P-value=0.0905, OR (allele)=1.55 (A), 95% CI=0.93-2.59 in German discovery sample; P-value=0.3378, OR (allele)=1.15 (G), 95% CI=0.87-1.51 in IMpACT replication sample; P-value=0.9958, OR (allele)=1.00 (A), 95% CI=0.79-1.27 in pooled data; PDT P-value=0.1779 for allele G in the family-based analysis More... This SNP did not reach p<0.05 in the association test with a...... This SNP did not reach p<0.05 in the association test with aADHD. Replication in 1035 aADHD patients and 1381 controls from IMpACT did not show any significant SNP association. More... Non-significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)

SNPs in LD with rs1542479 (count: 4) View in gBrowse (chr9:93297966..93404408 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 4)