ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs12690808 dbSNP Ensembl
Location chr7:34606336(Fwd)
Variant Alleles G/T
Ancestral Allele T
Functional Annotation downstream_gene_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant.
Consequence to Transcript downstream_gene_variant(ENST00000358772)
intron_variant(ENST00000419766; ENST00000537560; ENST00000539747)
nc_transcript_variant(ENST00000419766; ENST00000439852; ENST00000537560; ENST00000539747)
non_coding_exon_variant(ENST00000439852)
No. of Studies 1 (significant: 0; non-significant: 1; trend: 0)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Neale BM, 2010 (b) T:G GLM P-value=3.72E-05, meta-analysis P-value=0.3395 GLM P-value=3.72E-05, meta-analysis P-value=0.3395 One of the top 100 SNPs from imputed IMAGE II dataset One of the top 100 SNPs from imputed IMAGE II dataset Non-significant

SNP related genes (count: 1)

Literature-origin genes (count: 0)

Genes from other sources Help (count: 1)


SNPs in LD with rs12690808 (count: 65) View in gBrowse (chr7:8743218..34696379 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 65)