ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs12052787 dbSNP Ensembl
Location Chr2:234666581(Fwd)
Variant Alleles C/T
Ancestral Allele C
Functional Annotation NMD_transcript_variant; downstream_gene_variant; intron_variant; upstream_gene_variant.
Consequence to Transcript NMD_transcript_variant(ENST00000446481; ENST00000484784; ENST00000450233)
downstream_gene_variant(ENST00000480628; ENST00000506676)
intron_variant(ENST00000344644; ENST00000373450; ENST00000373445; ENST00000373426; ENST00000373424; ENST00000354728; ENST00000305139; ENST00000373414; ENST00000373409; ENST00000484784; ENST00000482026; ENST00000450233; ENST00000446481; ENST00000406651)
upstream_gene_variant(ENST00000360418; ENST00000305208; ENST00000421868; ENST00000449669; ENST00000450901; ENST00000389816)
No. of Studies 0 (significant: 0; non-significant: 0; trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 9)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 8)


SNPs in LD with rs12052787 (count: 1) View in gBrowse (chr2:234584324..234666581 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 1)

LD-proxies (count: 0)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014