ADHDgene Database

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Large-scale studies

Data Summary

Published Variant
- SNP: 1391
- CNV: 398
- Others: 173
Published Gene: 359
Published Region: 128
Pathway by PBA: 8
Study: 361

Detail ...

Gene Report

Basic Info

Approved Symbol	COPB2
Symbol Alias	beta'-COP, betaprime-COP
Approved Name	coatomer protein complex, subunit beta 2 (beta prime)
Location	3q23
Position	chr3:139074442-139108574, -
External Links	HGNC: 2232 Entrez Gene: 9276 Ensembl: ENSG00000184432 UCSC: uc003etf.3
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	Mapped by PBA pathway

Gene related studies (count: 0)

Gene related SNPs (count: 0)

Gene related CNVs (count: 0)

Gene related other variant (count: 0)

Gene related regions (count: 0)

Gene related GO terms (count: 12)

GO terms by PBA (with statistical significance of FDR<0.05) (count: 1)

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0048193	Golgi vesicle transport	Biological Process		49

GO terms by database search (count: 11)

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0006891	intra-Golgi vesicle-mediated transport	Biological Process	IDA[8335000]	13
GO:0015629	actin cytoskeleton	Cellular Component		26
GO:0016044	cellular membrane organization	Biological Process		24
GO:0030126	COPI vesicle coat	Cellular Component	IDA[14729954]	8
GO:0048205	COPI coating of Golgi vesicle	Biological Process		8
GO:0005198	structural molecule activity	Molecular Function		29
GO:0005737	cytoplasm	Cellular Component		690
GO:0005794	Golgi apparatus	Cellular Component		157
GO:0005829	cytosol	Cellular Component		447
GO:0006886	intracellular protein transport	Biological Process		43
GO:0006890	retrograde vesicle-mediated transport, Golgi to ER	Biological Process		16

Gene related KEGG pathways (count: 0)

Genes shared at least 5 GO terms with COPB2 (count: 10)

Gene Symbol	Pathway Count	Pathway List
COPB1	9	intra-Golgi vesicle-mediated transport; cellular membrane organization; COPI vesicle coat; Golgi vesicle transport; COPI coating of Golgi vesicle; structural molecule activity; cytosol; intracellular protein transport; retrograde vesicle-mediated transport, Golgi to ER;
COPE	9	intra-Golgi vesicle-mediated transport; cellular membrane organization; COPI vesicle coat; Golgi vesicle transport; COPI coating of Golgi vesicle; structural molecule activity; Golgi apparatus; cytosol; retrograde vesicle-mediated transport, Golgi to ER;
COPZ1	8	intra-Golgi vesicle-mediated transport; cellular membrane organization; COPI vesicle coat; Golgi vesicle transport; COPI coating of Golgi vesicle; cytosol; intracellular protein transport; retrograde vesicle-mediated transport, Golgi to ER;
COG3	6	intra-Golgi vesicle-mediated transport; Golgi vesicle transport; cytoplasm; Golgi apparatus; intracellular protein transport; retrograde vesicle-mediated transport, Golgi to ER;
COPG2	6	intra-Golgi vesicle-mediated transport; COPI vesicle coat; Golgi vesicle transport; structural molecule activity; intracellular protein transport; retrograde vesicle-mediated transport, Golgi to ER;
ARCN1	6	cellular membrane organization; COPI vesicle coat; COPI coating of Golgi vesicle; cytosol; intracellular protein transport; retrograde vesicle-mediated transport, Golgi to ER;
NAPA	5	intra-Golgi vesicle-mediated transport; cellular membrane organization; Golgi vesicle transport; cytosol; intracellular protein transport;
STX16	5	intra-Golgi vesicle-mediated transport; Golgi vesicle transport; cytoplasm; Golgi apparatus; intracellular protein transport;
GBF1	5	cellular membrane organization; Golgi vesicle transport; COPI coating of Golgi vesicle; Golgi apparatus; retrograde vesicle-mediated transport, Golgi to ER;
TMED10	5	Golgi vesicle transport; COPI coating of Golgi vesicle; Golgi apparatus; intracellular protein transport; retrograde vesicle-mediated transport, Golgi to ER;

Genes shared at least 2 KEGG pathways with COPB2 (count: 0)

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Region: chr3:139074442..139108574 View in gBrowse