ADHDgene Database

SNP Report

Basic Info

Name	rs9606189 dbSNP Ensembl
Location	Chr22:19924612(Fwd)
Variant Alleles	G/C
Ancestral Allele	G
Functional Annotation	intron_variant; nc_transcript_variant; upstream_gene_variant.
Consequence to Transcript	intron_variant(ENST00000400521; ENST00000400519; ENST00000400525; ENST00000474308; ENST00000535882; ENST00000334363; ENST00000496729) nc_transcript_variant(ENST00000474308; ENST00000496729) upstream_gene_variant(ENST00000400518; ENST00000403710; ENST00000361682; ENST00000467943; ENST00000491939; ENST00000407537; ENST00000542719; ENST00000403184)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
COMT	catechol-O-methyltransferase	22q11.21	25(5/20/0)

Approved Symbol	Approved Name	Location
TXNRD2	thioredoxin reductase 2	22q11.21

SNPs in LD with rs9606189 (count: 3) View in gBrowse (chr22:19924612..19930121 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs737866	intron_variant; nc_transcript_variant; upstream_gene_variant	1(0/1/0)	1.0[CEU]; 1.0[CHB]; 1.0[JPT]
rs737865	intron_variant; nc_transcript_variant; upstream_gene_variant	1(0/1/0)	1.0[CEU]; 1.0[CHB]; 1.0[JPT]
rs2020917	intron_variant; nc_transcript_variant; upstream_gene_variant	1(0/1/0)	1.0[CEU]; 1.0[CHB]; 1.0[JPT]