ADHDgene Database

SNP Report

Basic Info

Name	rs8068462 dbSNP Ensembl
Location	Chr17:63639892(Fwd)
Variant Alleles	C/A
Ancestral Allele	C
Functional Annotation	NMD_transcript_variant; intron_variant; nc_transcript_variant; upstream_gene_variant.
Consequence to Transcript	NMD_transcript_variant(ENST00000581734) intron_variant(ENST00000535342; ENST00000583466; ENST00000581739; ENST00000582795; ENST00000317442; ENST00000581734; ENST00000580694; ENST00000537949; ENST00000392769; ENST00000541355) nc_transcript_variant(ENST00000583466; ENST00000582795; ENST00000580694) upstream_gene_variant(ENST00000577662; ENST00000585168)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
CEP112	centrosomal protein 112kDa	17q24.2	1(0/0/1)

SNPs in LD with rs8068462 (count: 1) View in gBrowse (chr17:63633073..63639892 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs2107654	3_prime_UTR_variant; NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant	1(0/1/0)	0.817[CEU]; 1.0[CHB]; 1.0[CHD]; 0.864[GIH]; 1.0[JPT]; 0.832[LWK]; 0.8[MEX]; 0.891[TSI]; 0.927[YRI]