ADHDgene Database

SNP Report

Basic Info

Name	rs7708866 dbSNP Ensembl
Location	Chr5:50676126(Fwd)
Variant Alleles	T/C
Ancestral Allele	T
Functional Annotation	intron_variant; nc_transcript_variant; upstream_gene_variant.
Consequence to Transcript	intron_variant(ENST00000559112) nc_transcript_variant(ENST00000559112) upstream_gene_variant(ENST00000601500; ENST00000511384; ENST00000558403; ENST00000230658)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
ISL1	ISL LIM homeobox 1	5q11.2	1(0/1/0)

SNPs in LD with rs7708866 (count: 1) View in gBrowse (chr5:50674131..50676126 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs11954894	downstream_gene_variant; nc_transcript_variant; non_coding_exon_variant; upstream_gene_variant	1(0/1/0)	1.0[CEU]; 1.0[CHB]; 1.0[JPT]; 1.0[YRI]