ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs719452 dbSNP Ensembl
Location chr1:115837057(Fwd)
Variant Alleles A/T
Ancestral Allele T
Functional Annotation intron_variant; nc_transcript_variant.
Consequence to Transcript intron_variant(ENST00000369512; ENST00000425449; LRG_260t1)
nc_transcript_variant(ENST00000425449)
No. of Studies 1 (significant: 1; non-significant: 0; trend: 0)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Ribases M, 2008 genotypic P-value=0.1; genotypic P-value=0.033, OR=1.35 (1.0...... genotypic P-value=0.1; genotypic P-value=0.033, OR=1.35 (1.02-1.78) in dominant model; genotypic P-value=0.45 in recessive model; allelic P-value=0.046, OR=1.25 (1-1.56) in Children More... provided evidence of association with childhood ADHD provided evidence of association with childhood ADHD Significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs719452 (count: 14) View in gBrowse (chr1:115833581..115857958 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 14)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014