ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs6541001 dbSNP Ensembl
Location Chr1:11837367(Fwd)
Variant Alleles C/T
Ancestral Allele C
Functional Annotation intron_variant; nc_transcript_variant; non_coding_exon_variant; upstream_gene_variant.
Consequence to Transcript intron_variant(ENST00000312793; ENST00000433342)
nc_transcript_variant(ENST00000376620; ENST00000484153)
non_coding_exon_variant(ENST00000484153; ENST00000376620)
upstream_gene_variant(ENST00000449278; ENST00000444493)
No. of Studies 0 (significant: 0; non-significant: 0; trend: 0)
Source LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)

Literature-origin genes (count: 0)

Genes from other sources Help (count: 2)


SNPs in LD with rs6541001 (count: 1) View in gBrowse (chr1:11837367..11854476 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 1)

LD-proxies (count: 0)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014