ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs6074109 dbSNP Ensembl
Location Chr20:10193294(Fwd)
Variant Alleles A/G
Ancestral Allele A
Functional Annotation intron_variant; nc_transcript_variant.
Consequence to Transcript intron_variant(ENST00000421143; ENST00000453544; ENST00000426491; ENST00000451151)
nc_transcript_variant(ENST00000421143; ENST00000453544; ENST00000426491; ENST00000451151)
No. of Studies 1 (significant: 0; non-significant: 1; trend: 0)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Kim JW, 2007 A/G G Single marker analysis FBAT P-value=0.075; Exploratory analy...... Single marker analysis FBAT P-value=0.075; Exploratory analyses FBAT P-value=0.079 for co-morbid CD, P-value=0.201 for co-morbid MDD, P-value=0.426 for co-morbid BD More... No association was found between ADHD or co-morbidities of A...... No association was found between ADHD or co-morbidities of ADHD and this SNP More... Non-significant

SNP related genes (count: 2)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 1)


SNPs in LD with rs6074109 (count: 31) View in gBrowse (chr20:10159081..10193294 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 31)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014