ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs604030 dbSNP Ensembl
Location chr1:23518227(Fwd)
Variant Alleles T/C
Ancestral Allele C
Functional Annotation downstream_gene_variant; intron_variant.
Consequence to Transcript downstream_gene_variant(ENST00000374619)
intron_variant(ENST00000314113)
No. of Studies 1 (significant: 1; non-significant: 0; trend: 0)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Ribases M, 2009(b) Case-control test: lowest P-value=0.015 for genotype analysi...... Case-control test: lowest P-value=0.015 for genotype analysis, P-value=0.038 for allele analysis in all childhood ADHD; lowest P-value=0.03 for genotype analysis, P-value=0.039 for allele analysis in childhood combined ADHD. More... no significance after correcting for multiple comparisons no significance after correcting for multiple comparisons Significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs604030 (count: 29) View in gBrowse (chr1:23354877..23565427 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 29)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014