ADHDgene Database

SNP Report

Basic Info

Name	rs4969377 dbSNP Ensembl
Location	Chr17:79053078(Fwd)
Variant Alleles	C/G
Ancestral Allele	C
Functional Annotation	NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant.
Consequence to Transcript	NMD_transcript_variant(ENST00000572329; ENST00000575750; ENST00000574804) downstream_gene_variant(ENST00000570913) intron_variant(ENST00000321280; ENST00000572329; ENST00000576470; ENST00000575712; ENST00000428708; ENST00000575989; ENST00000575750; ENST00000435091; ENST00000575245; ENST00000576364; ENST00000572918; ENST00000575958; ENST00000573894; ENST00000572073; ENST00000571530; ENST00000321300; ENST00000573659; ENST00000392411; ENST00000573017; ENST00000573677; ENST00000574804) nc_transcript_variant(ENST00000576470; ENST00000576364; ENST00000573894; ENST00000573017) upstream_gene_variant(ENST00000577097; ENST00000574688)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
BAIAP2	BAI1-associated protein 2	17q25	1(1/0/0)

SNPs in LD with rs4969377 (count: 2) View in gBrowse (chr17:79053078..79074548 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs4969245	NMD_transcript_variant; intron_variant; nc_transcript_variant; upstream_gene_variant	1(0/1/0)	1.0[CEU]; 1.0[CHB]; 1.0[JPT]
rs4075482	NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant	1(0/1/0)	0.911[CHB]; 0.912[JPT]