ADHDgene Database

SNP Report

Basic Info

Name	rs4942578 dbSNP Ensembl
Location	Chr13:47432610(Fwd)
Variant Alleles	T/G
Ancestral Allele	T
Functional Annotation	downstream_gene_variant; intron_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000455126; ENST00000452352; ENST00000430913) intron_variant(ENST00000542664; ENST00000543956; ENST00000378688)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
HTR2A	5-hydroxytryptamine (serotonin) receptor 2A	13q14-q21	12(6/6/0)

Approved Symbol	Approved Name	Location
HTR2A-AS1	HTR2A antisense RNA 1 (non-protein coding)	13q14.2

SNPs in LD with rs4942578 (count: 2) View in gBrowse (chr13:47432154..47433355 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs9316233	downstream_gene_variant; intron_variant	1(1/0/0)	0.939[CEU]
rs2224721	downstream_gene_variant; intron_variant	1(1/0/0)	1.0[CHB]; 1.0[JPT]; 0.822[YRI]