ADHDgene Database

SNP Report

Basic Info

Name	rs4783899 dbSNP Ensembl
Location	Chr16:55687212(Fwd)
Variant Alleles	G/T
Ancestral Allele	G
Functional Annotation	upstream_gene_variant.
Consequence to Transcript	upstream_gene_variant(ENST00000414754; ENST00000568655; ENST00000566163; ENST00000379906; ENST00000568529; ENST00000568943; ENST00000219833; ENST00000561820)
No. of Studies	1 (significant: 0; non-significant: 1; trend: 0)
Source	Literature-origin

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result of Statistical Analysis
Sengupta, S. M., 2012	G/T		P-value=0.09, Z statistic (allele 1)=¨C1.69 P-value=0.09, Z statistic (allele 1)=¨C1.69	No significant association was found in this study. No significant association was found in this study.	Non-significant

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
SLC6A2	solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2	16q12.2	16(10/5/1)

SNPs in LD with rs4783899 (count: 1) View in gBrowse (chr16:55687212..55706391 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs36024	downstream_gene_variant; intron_variant	3(0/3/0)	0.859[GIH]