ADHDgene Database

SNP Report

Basic Info

Name	rs4717806 dbSNP Ensembl
Location	Chr7:73116477(Fwd)
Variant Alleles	T/A
Ancestral Allele	T
Functional Annotation	NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant; upstream_gene_variant.
Consequence to Transcript	NMD_transcript_variant(ENST00000436944) downstream_gene_variant(ENST00000265758; ENST00000462135; ENST00000442099; ENST00000494245; ENST00000453316; ENST00000471215; ENST00000470878; ENST00000423497; ENST00000430446; ENST00000461441; ENST00000463307; ENST00000430270) intron_variant(ENST00000491427; ENST00000480126; ENST00000497980; ENST00000395154; ENST00000423166; ENST00000222812; ENST00000395155; ENST00000395156; ENST00000496216; ENST00000436944) nc_transcript_variant(ENST00000491427; ENST00000480126; ENST00000497980; ENST00000496216) upstream_gene_variant(ENST00000484736; ENST00000491645)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
STX1A	syntaxin 1A (brain)	7q11.2	3(2/1/0)

Approved Symbol	Approved Name	Location
WBSCR22	Williams Beuren syndrome chromosome region 22	7q11.23

SNPs in LD with rs4717806 (count: 2) View in gBrowse (chr7:73116477..73125263 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs4363087	3_prime_UTR_variant; NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant; upstream_gene_variant	1(1/0/0)	0.805[CEU]
rs941298	intron_variant; nc_transcript_variant; upstream_gene_variant	1(1/0/0)	0.952[CEU]; 0.888[CHB]; 1.0[JPT]