ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs463379 dbSNP Ensembl
Location Chr5:1431164(Fwd)
Variant Alleles G/C
Ancestral Allele G
Functional Annotation intron_variant.
Consequence to Transcript intron_variant(ENST00000453492; ENST00000513308; ENST00000270349)
No. of Studies 3 (significant: 1; non-significant: 2; trend: 0)
Source Literature-origin

SNP related studies (count: 3)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Shang CY, 2011 G/C G allele FBAT P-value=1, Z=0 for total sample; G allele FBAT...... G allele FBAT P-value=1, Z=0 for total sample; G allele FBAT P-value=0.604, Z=0.518 for combined subtype; C allele FBAT P-value=0.574, Z=0.563 for inattentive subtype More... no significant associations in the total sample no significant associations in the total sample Non-significant
Genro JP, 2008 C/G P-value=0.347 for total sample; P-value=0.185 for combined s...... P-value=0.347 for total sample; P-value=0.185 for combined sample More... no allele was significantly more transmitted than expected no allele was significantly more transmitted than expected Non-significant
Friedel S, 2007 C/G C FAMHAP P-value=0.0002 in single marker association analysis FAMHAP P-value=0.0002 in single marker association analysis significantly associated with ADHD upon correction for multi...... significantly associated with ADHD upon correction for multiple testing (P-value=0.0046) More... Significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs463379 (count: 10) View in gBrowse (chr5:1427803..1432825 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 1)

LD-proxies (count: 9)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014