ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs362569 dbSNP Ensembl
Location chr20:10246733(Fwd)
Variant Alleles T/C
Ancestral Allele T
Functional Annotation intron_variant; nc_transcript_variant.
Consequence to Transcript intron_variant(ENST00000254976; ENST00000304886; ENST00000421143; ENST00000430336; ENST00000453544)
nc_transcript_variant(ENST00000421143; ENST00000453544)
No. of Studies 3 (significant: 0; non-significant: 3; trend: 0)
Source Literature-origin

SNP related studies (count: 3)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Nyman ES, 2007 No available information. No available information. No evidence of association was seen. No evidence of association was seen. Non-significant
Feng Y, 2005(b) T/C allelic TDT P-value=0.68, X2=0.17 in Irvine sampl...... allelic TDT P-value=0.68, X2=0.17 in Irvine sample; allelic TDT P-value=0.142, X2=2.162 in Toronto sample More... there was no significant result both in the Toronto sample a...... there was no significant result both in the Toronto sample and the Irvine sample More... Non-significant
Sarkar, K., 2012 C/T allelic P-value=0.58, X2=0.31 for case-control, P...... allelic P-value=0.58, X2=0.31 for case-control, P-value=0.46, X2=0.54 for family-based; genotypic P-value=0.05, X2=5.79 for case-control, P-value=0.51, X2=1.33 for family-based; X2=0.87, TDT P-value=0.35, Relative risk (95% CI)=1.5 (0.8¨C3.0) More... Case-control analysis revealed lack of any significant diffe...... Case-control analysis revealed lack of any significant difference in allelic frequencies between ADHD probands, their parents and controls P>0.05. rs362569 and rs1051312 failed to reveal any preferential transmission. More... Non-significant

SNP related genes (count: 2)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 1)


SNPs in LD with rs362569 (count: 5) View in gBrowse (chr20:10236231..10253082 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 5)