ADHDgene Database

SNP Report

Basic Info

Name	rs362555 dbSNP Ensembl
Location	Chr20:10309836(Fwd)
Variant Alleles	G/A
Ancestral Allele	A
Functional Annotation	intron_variant; nc_transcript_variant.
Consequence to Transcript	intron_variant(ENST00000421143; ENST00000453544) nc_transcript_variant(ENST00000421143; ENST00000453544)
No. of Studies	1 (significant: 0; non-significant: 1; trend: 0)
Source	Literature-origin

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result of Statistical Analysis
Kim JW, 2007	A/G	G	Single marker analysis FBAT P-value=0.949; Exploratory analy...... Single marker analysis FBAT P-value=0.949; Exploratory analyses FBAT P-value=0.571 for co-morbid CD, P-value=0.714 for co-morbid MDD, P-value=0.619 for co-morbid BD More...	No association was found between ADHD or co-morbidities of A...... No association was found between ADHD or co-morbidities of ADHD and this SNP More...	Non-significant

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
SNAP25	synaptosomal-associated protein, 25kDa	20p12-p11.2	18(13/5/0)

Approved Symbol	Approved Name	Location
SNAP25-AS1	SNAP25 antisense RNA 1	20p12.2

SNPs in LD with rs362555 (count: 3) View in gBrowse (chr20:10304374..10310342 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	r²[population]
rs6108469	intron_variant; nc_transcript_variant	0.862[CHB]; 0.828[CHD]
rs6108470	intron_variant; nc_transcript_variant	0.862[CHB]; 0.804[CHD]
rs362613	intron_variant; nc_transcript_variant; upstream_gene_variant	1.0[CEU]