ADHDgene Database

SNP Report

Basic Info

Name	rs333229 dbSNP Ensembl
Location	Chr2:108631384(Fwd)
Variant Alleles	G/T
Ancestral Allele	G
Functional Annotation	downstream_gene_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000409059; ENST00000540517; ENST00000264047)
No. of Studies	1 (significant: 1; non-significant: 0; trend: 0)
Source	Literature-origin

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result of Statistical Analysis
English BA, 2009	A/G		Case-control allelic test: P-value=0.008 for Caucasian group...... Case-control allelic test: P-value=0.008 for Caucasian group, P-value=0.004 for Caucasian-male group; family-based allelic test: TDT minimum P-value=0.347 under a dominant model More...	a significant decrease of the 3'SNP minor allele in Caucasia...... a significant decrease of the 3'SNP minor allele in Caucasian male subjects More...	Significant

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
SLC5A7	solute carrier family 5 (choline transporter), member 7	2q12	1(1/0/0)

SNPs in LD with rs333229 (count: 3) View in gBrowse (chr2:108631051..108635697 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.