ADHDgene Database

SNP Report

Basic Info

Name	rs250681 dbSNP Ensembl
Location	Chr5:1428011(Fwd)
Variant Alleles	C/T
Ancestral Allele	T
Functional Annotation	intron_variant.
Consequence to Transcript	intron_variant(ENST00000513308; ENST00000453492; ENST00000270349)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
SLC6A3	solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	5p15.3	68(42/25/1)

SNPs in LD with rs250681 (count: 4) View in gBrowse (chr5:1416142..1438354 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs37020	intron_variant; upstream_gene_variant	2(1/1/0)	1.0[CEU]; 1.0[CHB]; 1.0[JPT]; 0.954[YRI]
rs403636	intron_variant	3(1/2/0)	0.893[CHB]; 0.921[CHD]; 0.95[JPT]
rs40358	downstream_gene_variant; intron_variant; nc_transcript_variant	1(0/1/0)	0.949[JPT]; 0.864[YRI]
rs464049	intron_variant	1(0/1/0)	0.925[ASW]; 1.0[CEU]; 1.0[CHB]; 0.973[CHD]; 1.0[GIH]; 1.0[JPT]; 1.0[LWK]; 1.0[MEX]; 0.945[MKK]; 0.977[TSI]; 1.0[YRI]