ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs2270112 dbSNP Ensembl
Location chrX:7170925(Fwd)
Variant Alleles C/G
Ancestral Allele G
Functional Annotation intron_variant.
Consequence to Transcript intron_variant(ENST00000217961)
No. of Studies 2 (significant: 2; non-significant: 0; trend: 0)
Source Literature-origin

SNP related studies (count: 2)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Brookes KJ, 2010 TDT P-value=0.03, OR=1.31 TDT P-value=0.03, OR=1.31 was previously genotyped and still significant in this large...... was previously genotyped and still significant in this larger sample but cannot survive stringent correction for multiple testing More... Significant
Brookes KJ, 2008(b) TDT P-value=0.034, OR=1.48 TDT P-value=0.034, OR=1.48 significantly associated significantly associated Significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs2270112 (count: 25) View in gBrowse (chrX:6975752..7280998 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 25)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014