ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs2269272 dbSNP Ensembl
Location chr5:36687856(Fwd)
Variant Alleles C/T
Ancestral Allele C
Functional Annotation 3_prime_UTR_variant; downstream_gene_variant; intron_variant; nc_transcript_variant.
Consequence to Transcript 3_prime_UTR_variant(ENST00000265113; ENST00000381918)
downstream_gene_variant(ENST00000506178)
intron_variant(ENST00000510740)
nc_transcript_variant(ENST00000510740)
No. of Studies 2 (significant: 1; non-significant: 1; trend: 0)
Source Literature-origin

SNP related studies (count: 2)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Turic D, 2005(a) C/T P-value=0.08 for pooled genotyping; allelic TRANSMIT P-value...... P-value=0.08 for pooled genotyping; allelic TRANSMIT P-value=0.007, X2=8.54 More... an excess of transmissions of T allele was confirmed an excess of transmissions of T allele was confirmed Significant
Laurin N, 2008(a) C/T P-value=0.963 in the catergorical analysis, P-value>0.05 in ...... P-value=0.963 in the catergorical analysis, P-value>0.05 in the quantitative analysis More... no significant evidence of association no significant evidence of association Non-significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs2269272 (count: 4) View in gBrowse (chr5:36684550..36696578 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 4)