ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs2143340 dbSNP Ensembl
Location chr6:24659071(Fwd)
Variant Alleles A/G
Ancestral Allele A
Functional Annotation intron_variant; nc_transcript_variant; non_coding_exon_variant.
Consequence to Transcript intron_variant(ENST00000341060; ENST00000378198; ENST00000478507; ENST00000545995)
nc_transcript_variant(ENST00000478285; ENST00000478507)
non_coding_exon_variant(ENST00000478285)
No. of Studies 1 (significant: 0; non-significant: 1; trend: 0)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Couto JM, 2009 G:A Single-marker TDT analysis P-value=0.712 Single-marker TDT analysis P-value=0.712 This marker in gene TTRAP was not associated with ADHD This marker in gene TTRAP was not associated with ADHD Non-significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs2143340 (count: 4) View in gBrowse (chr6:24651388..24693523 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 4)