ADHDgene Database

SNP Report

Basic Info

Name	rs211102 dbSNP Ensembl
Location	Chr11:18046493(Fwd)
Variant Alleles	A/G
Ancestral Allele	G
Functional Annotation	NMD_transcript_variant; downstream_gene_variant; intron_variant; upstream_gene_variant.
Consequence to Transcript	NMD_transcript_variant(ENST00000417164) downstream_gene_variant(ENST00000528338) intron_variant(ENST00000341556; ENST00000417164; ENST00000250018) upstream_gene_variant(ENST00000525406; ENST00000525523)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
TPH1	tryptophan hydroxylase 1	11p15.3-p14	6(2/4/0)

SNPs in LD with rs211102 (count: 2) View in gBrowse (chr11:18046493..18063977 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs591556	NMD_transcript_variant; intron_variant	1(0/1/0)	0.936[CEU]; 1.0[CHB]; 0.935[CHD]; 0.856[GIH]; 1.0[JPT]; 0.829[LWK]; 1.0[MEX]; 0.913[MKK]; 1.0[TSI]; 0.921[YRI]
rs623580	upstream_gene_variant	1(0/1/0)	0.924[YRI]