ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs1979398 dbSNP Ensembl
Location chr5:52194327(Fwd)
Variant Alleles A/G
Ancestral Allele G
Functional Annotation intron_variant; upstream_gene_variant.
Consequence to Transcript intron_variant(ENST00000282588)
upstream_gene_variant(ENST00000504669)
No. of Studies 1 (significant: 0; non-significant: 1; trend: 0)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Yang L, 2013 P-value=0.0000258 P-value=0.0000258 The SNPs associated with P values of 1E-5 or lower The SNPs associated with P values of 1E-5 or lower Non-significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs1979398 (count: 10) View in gBrowse (chr5:52185944..52194327 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 10)