ADHDgene Database
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Type:
  • Large-scale studies
  • Data Summary
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs17495366 dbSNP Ensembl
Location Chr2:50268616(Fwd)
Variant Alleles T/C
Ancestral Allele T
Functional Annotation intron_variant.
Consequence to Transcript intron_variant(ENST00000342183; ENST00000401710; ENST00000404971; ENST00000401669; ENST00000405472; ENST00000406316; ENST00000402717; ENST00000406859)
No. of Studies 1 (significant: 0; non-significant: 1; trend: 0)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Neale BM, 2010 (b) T:C GLM P-value=3.12E-05, meta-analysis P-value=0.01472 GLM P-value=3.12E-05, meta-analysis P-value=0.01472 One of the top 100 SNPs from imputed IMAGE II dataset One of the top 100 SNPs from imputed IMAGE II dataset Non-significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs17495366 (count: 2) View in gBrowse (chr2:50232325..50279475 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 2)

Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: Feb 26, 2014