ADHDgene Database

SNP Report

Basic Info

Name	rs16969968 dbSNP Ensembl
Location	Chr15:78882925(Fwd)
Variant Alleles	G/A
Ancestral Allele	G
Functional Annotation	downstream_gene_variant; intron_variant; missense_variant; nc_transcript_variant; non_coding_exon_variant.
Consequence to Transcript	downstream_gene_variant(ENST00000326828; ENST00000348639; ENST00000559002; ENST00000559658) intron_variant(ENST00000559554; ENST00000559576; ENST00000394802) missense_variant(ENST00000299565) nc_transcript_variant(ENST00000567141) non_coding_exon_variant(ENST00000567141)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
CHRNA3	cholinergic receptor, nicotinic, alpha 3	15q24	1(0/1/0)

Approved Symbol	Approved Name	Location
CHRNA5	cholinergic receptor, nicotinic, alpha 5	15q24

SNPs in LD with rs16969968 (count: 1) View in gBrowse (chr15:78882925..78894339 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs1051730	NMD_transcript_variant; nc_transcript_variant; non_coding_exon_variant; synonymous_variant	1(0/1/0)	1.0[CEU]; 1.0[CHB]; 1.0[CHD]; 1.0[GIH]; 1.0[JPT]; 0.941[MEX]; 0.954[TSI]