ADHDgene Database

SNP Report

Basic Info

Name	rs1533123 dbSNP Ensembl
Location	Chr2:79898937(Fwd)
Variant Alleles	C/T
Ancestral Allele	T
Functional Annotation	intron_variant.
Consequence to Transcript	intron_variant(ENST00000466387; ENST00000496558; ENST00000409266; ENST00000409971; ENST00000451966; ENST00000402739; ENST00000361291; ENST00000541047; ENST00000540488)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
CTNNA2	catenin (cadherin-associated protein), alpha 2	2p12-p11.1	2(1/1/0)

SNPs in LD with rs1533123 (count: 1) View in gBrowse (chr2:79882260..79898937 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs13395022	intron_variant	1(0/1/0)	1.0[CEU]; 0.82[CHB]; 0.815[CHD]; 1.0[JPT]; 0.914[LWK]; 1.0[MEX]; 1.0[TSI]; 0.873[YRI]