ADHDgene Database

SNP Report

Basic Info

Name	rs1394398 dbSNP Ensembl
Location	Chr3:143563113(Fwd)
Variant Alleles	T/A
Ancestral Allele	T
Functional Annotation	NMD_transcript_variant; downstream_gene_variant; intron_variant.
Consequence to Transcript	NMD_transcript_variant(ENST00000474727) downstream_gene_variant(ENST00000498717) intron_variant(ENST00000474727; ENST00000474151; ENST00000316549)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
SLC9A9	solute carrier family 9 (sodium/hydrogen exchanger), member 9	3q23-q24	2(2/0/0)

SNPs in LD with rs1394398 (count: 2) View in gBrowse (chr3:143563113..143571267 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs11714060	5_prime_UTR_variant; NMD_transcript_variant; nc_transcript_variant; non_coding_exon_variant	1(1/0/0)	1.0[CEU]
rs9870661	downstream_gene_variant; upstream_gene_variant	1(1/0/0)	1.0[CEU]