ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs1242058 dbSNP Ensembl
Location chr3:143377573(Fwd)
Variant Alleles C/A
Ancestral Allele C
Functional Annotation intron_variant; nc_transcript_variant.
Consequence to Transcript intron_variant(ENST00000316549; ENST00000483124)
nc_transcript_variant(ENST00000483124)
No. of Studies 1 (significant: 1; non-significant: 0; trend: 0)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Brookes K, 2006 A/C UNPHASED TDT P-value=0.038; WHAP TDT P-value=0.042 UNPHASED TDT P-value=0.038; WHAP TDT P-value=0.042 significant association was observed in both UNPHASED and WH...... significant association was observed in both UNPHASED and WHAP analyses More... Significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs1242058 (count: 5) View in gBrowse (chr3:143360568..143377573 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 5)