ADHDgene Database

SNP Report

Basic Info

Name	rs12324434 dbSNP Ensembl
Location	Chr15:55714435(Fwd)
Variant Alleles	T/C
Ancestral Allele	T
Functional Annotation	NMD_transcript_variant; downstream_gene_variant; intron_variant; nc_transcript_variant.
Consequence to Transcript	NMD_transcript_variant(ENST00000524160) downstream_gene_variant(ENST00000570794; ENST00000569691) intron_variant(ENST00000448430; ENST00000380679; ENST00000565113; ENST00000524160; ENST00000568310) nc_transcript_variant(ENST00000565113; ENST00000568310)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 2)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
DYX1C1	dyslexia susceptibility 1 candidate 1	15q21.1	1(0/1/0)

Approved Symbol	Approved Name	Location
DYX1C1-CCPG1	DYX1C1-CCPG1 readthrough (non-protein coding)	15q

SNPs in LD with rs12324434 (count: 1) View in gBrowse (chr15:55714435..55759193 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs600753	3_prime_UTR_variant; NMD_transcript_variant; intron_variant; missense_variant; nc_transcript_variant; non_coding_exon_variant	1(0/1/0)	1.0[CHB]; 0.888[CHD]; 0.898[JPT]