ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs12317552 dbSNP Ensembl
Location chr12:63040610(Fwd)
Variant Alleles C/T
Ancestral Allele C
Functional Annotation 3_prime_UTR_variant; downstream_gene_variant; upstream_gene_variant.
Consequence to Transcript 3_prime_UTR_variant(ENST00000228705)
downstream_gene_variant(ENST00000551214)
upstream_gene_variant(ENST00000459527)
No. of Studies 1 (significant: 0; non-significant: 0; trend: 1)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Neale BM, 2010 (b) T:C GLM P-value=9.14E-06, meta-analysis P-value=0.005663 GLM P-value=9.14E-06, meta-analysis P-value=0.005663 One of the top 100 SNPs from imputed IMAGE II dataset One of the top 100 SNPs from imputed IMAGE II dataset Trend

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs12317552 (count: 6) View in gBrowse (chr12:63010175..63050251 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 6)