SNP Report
Basic Info
SNP related studies (count: 1)
SNP related genes (count: 1)
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.
Literature-origin SNPs (count: 0)
LD-proxies (count: 28)
rs_ID |
Functional Annotation |
r2[population] |
rs7984523
|
intron_variant |
0.87[CHB]; 0.826[JPT]
|
rs2122247
|
intron_variant; nc_transcript_variant |
0.818[CHD]
|
rs1012053
|
intron_variant |
0.854[GIH]; 0.905[MEX]; 0.829[MKK]; 0.813[TSI]
|
rs12585075
|
intron_variant; upstream_gene_variant |
0.864[CHB]; 0.884[CHD]
|
rs1184924
|
intron_variant |
0.802[YRI]
|
rs1170178
|
intron_variant |
0.861[CHB]
|
rs1170187
|
intron_variant |
1.0[CEU]; 1.0[CHB]; 1.0[CHD]; 1.0[GIH]; 1.0[JPT]; 1.0[LWK]; 1.0[MEX]; 1.0[MKK]; 1.0[TSI]; 1.0[YRI]
|
rs1177637
|
intron_variant |
1.0[CEU]; 0.955[CHB]; 0.953[CHD]; 1.0[GIH]; 1.0[JPT]; 1.0[LWK]; 1.0[MEX]; 1.0[MKK]; 1.0[TSI]; 1.0[YRI]
|
rs1170158
|
intron_variant |
1.0[CEU]; 0.955[CHB]; 0.929[CHD]; 1.0[GIH]; 0.86[JPT]; 1.0[MEX]; 0.912[MKK]; 1.0[TSI]; 0.802[YRI]
|
rs1170173
|
intron_variant |
1.0[CEU]; 0.902[CHB]; 1.0[JPT]; 1.0[YRI]
|
rs2253650
|
intron_variant |
0.854[GIH]; 0.902[MEX]; 0.829[MKK]; 0.813[TSI]
|
rs682573
|
intron_variant; upstream_gene_variant |
0.864[CHB]; 0.859[CHD]; 0.802[YRI]
|
rs12583267
|
intron_variant; nc_transcript_variant |
0.8[JPT]
|
rs12584544
|
intron_variant; nc_transcript_variant |
0.82[CHD]
|
rs670676
|
intron_variant |
1.0[CEU]; 0.955[CHB]; 0.906[CHD]; 1.0[GIH]; 0.86[JPT]; 1.0[MEX]; 0.906[MKK]; 1.0[TSI]; 0.802[YRI]
|
rs685951
|
intron_variant |
1.0[CEU]; 1.0[CHB]; 1.0[JPT]; 1.0[YRI]
|
rs12870823
|
intron_variant; nc_transcript_variant |
0.813[CHB]
|
rs12876965
|
intron_variant; upstream_gene_variant |
0.819[CHB]; 0.884[CHD]
|
rs1170190
|
intron_variant |
1.0[CEU]; 1.0[CHB]; 1.0[JPT]; 1.0[YRI]
|
rs4598803
|
intron_variant; nc_transcript_variant |
0.82[CHD]
|
rs17645393
|
intron_variant; nc_transcript_variant |
0.817[CHB]
|
rs12870816
|
intron_variant; nc_transcript_variant |
0.804[CHB]
|
rs12585267
|
intron_variant; nc_transcript_variant |
0.82[CHD]
|
rs1750017
|
intron_variant |
0.858[CHB]; 0.802[YRI]
|
rs10492439
|
intron_variant; nc_transcript_variant |
0.826[CHB]
|
rs12865430
|
intron_variant; nc_transcript_variant |
0.822[CHB]
|
rs10492441
|
intron_variant; nc_transcript_variant |
0.816[CHB]
|
rs1170188
|
intron_variant |
1.0[CEU]; 1.0[CHB]; 0.976[CHD]; 1.0[GIH]; 1.0[JPT]; 0.872[LWK]; 1.0[MEX]; 0.968[MKK]; 1.0[TSI]; 0.88[YRI]
|