ADHDgene Database

SNP Report

Basic Info

Name	rs11080122 dbSNP Ensembl
Location	Chr17:28547335(Fwd)
Variant Alleles	T/C
Ancestral Allele	C
Functional Annotation	intron_variant.
Consequence to Transcript	intron_variant(ENST00000261707; ENST00000394821; ENST00000401766)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
SLC6A4	solute carrier family 6 (neurotransmitter transporter, serotonin), member 4	17q11.2	25(13/12/0)

SNPs in LD with rs11080122 (count: 3) View in gBrowse (chr17:28543389..28550814 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs2020936	intron_variant	1(0/1/0)	1.0[CEU]; 0.863[CHD]; 0.897[JPT]; 0.905[MEX]; 1.0[TSI]
rs8076005	intron_variant	1(1/0/0)	0.939[CEU]; 0.888[CHB]; 0.927[CHD]; 0.897[JPT]; 0.825[MEX]; 0.934[TSI]
rs140700	intron_variant	1(1/0/0)	0.888[JPT]