ADHDgene Database
  • Published Variant
  • Published Gene: 359
  • Published Region: 128
  • Pathway by PBA: 8
  • Study: 361

SNP Report

Basic Info
Name rs1040399 dbSNP Ensembl
Location chrX:43625399(Fwd)
Variant Alleles G/A
Ancestral Allele G
Functional Annotation downstream_gene_variant.
Consequence to Transcript downstream_gene_variant(ENST00000378069; ENST00000536181; ENST00000538942)
No. of Studies 1 (significant: 1; non-significant: 0; trend: 0)
Source Literature-origin

SNP related studies (count: 1)
Reference Allele Change Risk Allele Statistical Values Author Comments Result of Statistical Analysis
Li J, 2008 C/T TDT P-value=1.87E-6, X2=22.72 TDT P-value=1.87E-6, X2=22.72 significantly biased transmitted to ADHD offspring significantly biased transmitted to ADHD offspring Significant

SNP related genes (count: 1)

Literature-origin genes (count: 1)

Genes from other sources Help (count: 0)


SNPs in LD with rs1040399 (count: 34) View in gBrowse (chrX:43614634..43684216 )
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.

Literature-origin SNPs (count: 0)

LD-proxies (count: 34)