ADHDgene Database

Gene Report

Basic Info

Approved Symbol	SPOCK3
Symbol Alias	testican-3
Approved Name	sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
Location	4q32.3
Position	chr4:167654535-168155947, -
External Links	HGNC: 13565 Entrez Gene: 50859 Ensembl: ENSG00000196104 UCSC: uc003iri.1
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	Mapped by CNV; Mapped by LD-proxy; Mapped by literature SNP

Gene related studies (count: 0)

Gene related SNPs (count: 2)

rs_ID	Location	Functional Annotation	No. of Studies (significant/non-significant/trend)
rs7657608	Chr4:168154181(Fwd)	NMD_transcript_variant; intron_variant	2(0/2/0)

rs_ID	Location	Functional Annotation
rs17600510	Chr4:168156453(Fwd)	upstream_gene_variant

Gene related CNVs (count: 1)

ID	Location	Size	Band	Type	Inheritance
CNV_Jarick[2012]_12	chr4:167382752-168375955 (NCBI36 / hg18)	993204	4q32.3	del

Gene related other variant (count: 0)

Gene related regions (count: 0)

Gene related GO terms (count: 9)

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0005509	calcium ion binding	Molecular Function		124
GO:0005615	extracellular space	Cellular Component	IDA[11751414]	126
GO:0007165	signal transduction	Biological Process		171
GO:0005539	glycosaminoglycan binding	Molecular Function		2
GO:0005578	proteinaceous extracellular matrix	Cellular Component		47
GO:0019800	peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan	Biological Process		2
GO:0031012	extracellular matrix	Cellular Component	IDA[11751414]	28
GO:0008191	metalloendopeptidase inhibitor activity	Molecular Function	IDA[11751414]	2
GO:0010951	negative regulation of endopeptidase activity	Biological Process	IDA[11751414]	7

Gene related KEGG pathways (count: 0)

Genes shared at least 5 GO terms with SPOCK3 (count: 0)

Genes shared at least 2 KEGG pathways with SPOCK3 (count: 0)

View in gBrowse

Region: chr4:167654535..168155947 View in gBrowse