ADHDgene Database

Gene Report

Basic Info

Approved Symbol	SMARCAL1
Symbol Alias	HHARP, HARP
Approved Name	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1
Name Alias	HepA-related protein, "ATP-driven annealing helicase"
Location	2q35
Position	chr2:217277137-217347776, +
External Links	HGNC: 11102 Entrez Gene: 50485 UCSC: uc002vgd.3
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	Mapped by significant region

Gene related studies (count: 0)

Gene related SNPs (count: 0)

Gene related CNVs (count: 0)

Gene related other variant (count: 0)

Gene related regions (count: 1)

Region Name	Position	No. of Studies (significant/non-significant/trend)
2q35	chr2:215300000-221500000	1 (1/0/0)

Gene related GO terms (count: 10)

ID	Name	Type	Evidence[PMID]	No. of Genes in ADHDgene
GO:0008094	DNA-dependent ATPase activity	Molecular Function	IMP[18974355]	4
GO:0016568	chromatin modification	Biological Process		16
GO:0036310	annealing helicase activity	Molecular Function	IMP[18974355]	1
GO:0005634	nucleus	Cellular Component	IDA[18974355]	770
GO:0005524	ATP binding	Molecular Function		228
GO:0006357	regulation of transcription from RNA polymerase II promoter	Biological Process	IMP[18974355]	42
GO:0006259	DNA metabolic process	Biological Process	IMP[18974355]	4
GO:0000733	DNA strand renaturation	Biological Process	IMP[18974355]	1
GO:0004386	helicase activity	Molecular Function		4
GO:0003677	DNA binding	Molecular Function		220

Gene related KEGG pathways (count: 0)

Genes shared at least 5 GO terms with SMARCAL1 (count: 1)

Gene Symbol	Pathway Count	Pathway List
SRCAP	5	nucleus; ATP binding; regulation of transcription from RNA polymerase II promoter; helicase activity; DNA binding;

Genes shared at least 2 KEGG pathways with SMARCAL1 (count: 0)

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Region: chr2:217277137..217347776 View in gBrowse