ADHDgene Database

Gene Report

Basic Info

Approved Symbol	C1orf173
Symbol Alias	DKFZp547I048, RP11-653A5.1
Approved Name	chromosome 1 open reading frame 173
Location	1p31.1
Position	chr1:75033795-75139422, -
External Links	HGNC: 25346 Entrez Gene: 127254 Ensembl: ENSG00000178965 UCSC: uc001dgg.2
No. of Studies	1 (significant: 0; non-significant: 1; trend: 0)
Source	Literature-origin; Mapped by LD-proxy; Mapped by literature SNP

Gene related studies (count: 1)

Reference	Statistical Values/Author Comments	Result of Statistical Analysis
Neale BM, 2010 (b)	No significant or Trend associated SNP was mapped in this gene.	Non-significant

Gene related SNPs (count: 15)

rs_ID	Location	Functional Annotation	No. of Studies (significant/non-significant/trend)
rs17095690	Chr1:75106741(Fwd)	intron_variant	1(0/1/0)

rs_ID	Location	Functional Annotation
rs696700	Chr1:75069093(Fwd)	intron_variant; nc_transcript_variant
rs696699	Chr1:75068061(Fwd)	intron_variant; nc_transcript_variant
rs696694	Chr1:75060313(Fwd)	intron_variant; nc_transcript_variant
rs696688	Chr1:75051340(Fwd)	downstream_gene_variant; intron_variant; upstream_gene_variant
rs696687	Chr1:75046829(Fwd)	intron_variant; upstream_gene_variant
rs696686	Chr1:75046402(Fwd)	intron_variant; upstream_gene_variant
rs2344506	Chr1:75040059(Fwd)	feature_truncation; intron_variant; nc_transcript_variant
rs3931879	Chr1:75030642(Fwd)	downstream_gene_variant
rs624818	Chr1:75126646(Fwd)	intron_variant
rs1417586	Chr1:75088911(Fwd)	downstream_gene_variant; intron_variant; nc_transcript_variant; non_coding_exon_variant
rs730645	Chr1:75118172(Fwd)	intron_variant
rs1340986	Chr1:75089200(Fwd)	downstream_gene_variant; intron_variant; nc_transcript_variant
rs696702	Chr1:75072038(Fwd)	intron_variant; nc_transcript_variant
rs699849	Chr1:75074988(Fwd)	downstream_gene_variant; intron_variant; nc_transcript_variant

Gene related CNVs (count: 0)

Gene related other variant (count: 0)

Gene related regions (count: 0)

Gene related GO terms (count: 0)

Gene related KEGG pathways (count: 0)

Genes shared at least 5 GO terms with C1orf173 (count: 0)

Genes shared at least 2 KEGG pathways with C1orf173 (count: 0)

View in gBrowse

Region: chr1:75033795..75139422 View in gBrowse