SNP Report

Basic Info
Name |
rs863127
dbSNP
Ensembl
|
Location |
chr14:85495988(Fwd) |
Variant Alleles |
C/G |
Ancestral Allele |
C |
No. of Studies |
1 (significant: 0; non-significant: 1; trend: 0) |
Source |
Literature-origin
|

SNP related studies (count: 1)

SNP related genes (count: 0)
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.
Literature-origin SNPs (count: 0)
LD-proxies (count: 15)

rs_ID |
Functional Annotation |
r2[population] |
rs10149477
|
|
1.0[CHB]; 1.0[JPT]
|
rs2210303
|
|
1.0[CHB]; 0.976[CHD]; 0.953[JPT]
|
rs2210304
|
|
1.0[CHB]; 0.947[JPT]
|
rs7159112
|
|
0.952[CHB]; 1.0[JPT]
|
rs10133786
|
|
0.95[CHB]; 0.9[JPT]
|
rs1471525
|
|
0.89[CHB]; 0.941[JPT]; 0.934[YRI]
|
rs17120689
|
|
1.0[CEU]; 1.0[TSI]; 1.0[CHB]; 0.953[CHD]; 0.952[JPT]; 1.0[GIH]; 0.843[LWK]; 0.831[MEX]; 0.851[MKK]; 0.832[YRI]
|
rs8010355
|
|
0.805[GIH]
|
rs856626
|
|
1.0[CHB]; 0.953[JPT]
|
rs12892188
|
|
0.954[CHB]; 0.952[CHD]; 1.0[JPT]
|
rs11622485
|
|
0.949[CHB]; 1.0[JPT]
|
rs4904228
|
|
0.893[ASW]; 1.0[CHB]; 0.977[CHD]; 1.0[JPT]; 1.0[LWK]; 0.941[MEX]; 0.832[MKK]; 0.875[YRI]
|
rs6574800
|
|
1.0[CHB]; 0.945[JPT]
|
rs10143721
|
|
0.804[CEU]; 0.953[CHB]; 1.0[JPT]
|
rs1871669
|
upstream_gene_variant |
0.893[ASW]; 1.0[CHB]; 1.0[CHD]; 1.0[JPT]; 0.871[LWK]; 0.941[MEX]; 0.875[YRI]
|