ADHDgene Database

SNP Report

Basic Info

Name	rs7495052 dbSNP Ensembl
Location	chr15:92552029(Fwd)
Variant Alleles	T/C
Ancestral Allele	T
Functional Annotation	intron_variant; nc_transcript_variant.
Consequence to Transcript	intron_variant(ENST00000318445; ENST00000424469; ENST00000553653; ENST00000555769; ENST00000556649) nc_transcript_variant(ENST00000553653; ENST00000555769; ENST00000556649)
No. of Studies	1 (significant: 0; non-significant: 0; trend: 1)
Source	Literature-origin

SNP related studies (count: 1)

Reference	Allele Change	Risk Allele	Statistical Values	Author Comments	Result of Statistical Analysis
Lasky-Su J, 2008			P-value=2.83E-06 under Recessive model for FBAT-PC IA sympto...... P-value=2.83E-06 under Recessive model for FBAT-PC IA symptoms More...	association finding with P-value association finding with P-value	Trend

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
SLCO3A1	solute carrier organic anion transporter family, member 3A1	15q26	1(0/0/1)

SNPs in LD with rs7495052 (count: 12) View in gBrowse (chr15:92546412..92564506 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	r²[population]
rs12906289	intron_variant; nc_transcript_variant	0.813[CHD]; 0.837[JPT]
rs12903900	intron_variant; nc_transcript_variant	1.0[CHD]; 1.0[JPT]
rs12905912	intron_variant; nc_transcript_variant	0.905[CHD]; 0.945[JPT]
rs7178378	intron_variant; nc_transcript_variant	1.0[CHB]; 0.945[JPT]
rs1983351	intron_variant; nc_transcript_variant	1.0[CEU]; 0.943[CHB]; 1.0[JPT]
rs12905905	intron_variant; nc_transcript_variant	0.831[JPT]
rs12904266	intron_variant; nc_transcript_variant	0.945[JPT]
rs8040010	intron_variant; nc_transcript_variant	0.945[JPT]
rs12912272	intron_variant; nc_transcript_variant	0.94[JPT]
rs12593984	intron_variant; nc_transcript_variant	0.945[JPT]
rs10468145	intron_variant; nc_transcript_variant	0.953[CHD]; 1.0[JPT]
rs12912997	intron_variant; nc_transcript_variant	0.945[JPT]