ADHDgene Database

SNP Report

Basic Info

Name	rs727644 dbSNP Ensembl
Location	Chr7:114109349(Fwd)
Variant Alleles	A/G
Ancestral Allele	A
Functional Annotation	NMD_transcript_variant; intron_variant; nc_transcript_variant.
Consequence to Transcript	NMD_transcript_variant(ENST00000412402; ENST00000441290; ENST00000440349) intron_variant(ENST00000412402; ENST00000441290; ENST00000440349; ENST00000462331; ENST00000324462; ENST00000393498; ENST00000393494; ENST00000408937; ENST00000350908; ENST00000459666; ENST00000393489; ENST00000378237; ENST00000360232; ENST00000390668; ENST00000403559; ENST00000393500; ENST00000393495; ENST00000452963) nc_transcript_variant(ENST00000459666)
No. of Studies	0 (significant: 0; non-significant: 0; trend: 0)
Source	LD-proxy

SNP related studies (count: 0)

SNP related genes (count: 1)

Approved Symbol	Approved Name	Location	No. of Studies (significant/non-significant/trend)
FOXP2	forkhead box P2	7q31	1(1/0/0)

SNPs in LD with rs727644 (count: 2) View in gBrowse (chr7:114056055..114110568 )

The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r²>=0.8.

rs_ID	Functional Annotation	#studies(significant/non-significant/trend)	r²[population]

rs12533005	NMD_transcript_variant; intron_variant; nc_transcript_variant	1(1/0/0)	0.921[CEU]
rs4727799	NMD_transcript_variant; intron_variant; nc_transcript_variant	1(1/0/0)	0.853[TSI]