SNP Report

Basic Info
Name |
rs7036351
dbSNP
Ensembl
|
Location |
chr9:34592699(Fwd) |
Variant Alleles |
C/T |
Ancestral Allele |
C |
Functional Annotation |
upstream_gene_variant.
|
Consequence to Transcript |
upstream_gene_variant(ENST00000351266; ENST00000378980; ENST00000417345) |
No. of Studies |
1 (significant: 1; non-significant: 0; trend: 0) |
Source |
Literature-origin
|

SNP related studies (count: 1)

SNP related genes (count: 1)
The LD data used here is based on HapMap rel#27. LD SNP pairs were selected with a threshold r2>=0.8.
Literature-origin SNPs (count: 0)
LD-proxies (count: 10)

rs_ID |
Functional Annotation |
r2[population] |
rs1061758
|
downstream_gene_variant; intron_variant; NMD_transcript_variant; upstream_gene_variant |
0.937[GIH]
|
rs11791806
|
downstream_gene_variant; upstream_gene_variant |
1.0[CEU]; 0.892[CHB]; 0.948[CHD]; 0.939[JPT]; 0.968[GIH]; 0.806[MKK]
|
rs3802427
|
downstream_gene_variant; intron_variant; upstream_gene_variant |
1.0[CEU]; 0.829[TSI]; 0.818[ASW]; 0.892[CHB]; 0.974[CHD]; 1.0[JPT]; 1.0[GIH]; 0.96[LWK]; 0.89[MKK]; 0.88[YRI]
|
rs16931689
|
downstream_gene_variant |
1.0[CEU]; 0.892[CHB]; 1.0[JPT]; 0.88[YRI]
|
rs3176818
|
downstream_gene_variant |
0.825[CEU]
|
rs3176813
|
intron_variant; upstream_gene_variant |
0.825[CEU]
|
rs4879816
|
intron_variant; nc_transcript_variant; upstream_gene_variant |
1.0[CEU]
|
rs10814130
|
upstream_gene_variant |
1.0[CEU]; 0.838[CHB]; 0.921[CHD]; 0.875[JPT]; 0.968[GIH]; 0.902[MKK]
|
rs10814129
|
intron_variant; splice_region_variant; upstream_gene_variant |
1.0[CEU]; 0.818[ASW]; 0.892[CHB]; 0.974[CHD]; 0.939[JPT]; 0.968[GIH]; 0.96[LWK]; 0.98[MKK]; 0.88[YRI]
|
rs4878585
|
intron_variant; nc_transcript_variant |
1.0[CEU]
|